BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A11SP1|AL426309
(774 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1178 1454 0.0
>3x_Contig1178
Length = 7379
Score = 1454 bits (727), Expect = 0.0
Identities = 760/775 (98%), Gaps = 2/775 (0%)
Strand = Plus / Minus
Query: 2 atttcaaccagtttcttgtccgtaataacacggtgaaa-gtccctcatgatattgtgttg 60
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6897 atttcatccagtttcttgtccgtaataacacggtgaaacgtccctcatgatattgtgttg 6838
Query: 61 tctattcgcatcgttcgccgatattattgcattctttctgttccaattttgtttcctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6837 tctattcgcatcgttcgccgatattattgcattctttctgttccaattttgtttcctaat 6778
Query: 121 caaaagtgattatattcatgctggtacttgctattcgattctcattttgtttaaaaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6777 caaaagtgattatattcatgctggtacttgctattcgattctcattttgtttaaaaacat 6718
Query: 181 acatgggtttcttcttctgaaagtracacgttgggccatcgttagttgtttcacgtttcc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6717 acatgggtttcttcttctgaaagtaacacgttgggccatcgttagttgtttcacgtttcc 6658
Query: 241 ttcgcttgaagatcttatgaatgtagtttaagacgtatgcraactagatactttgcctct 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6657 ttcgcttgaagatcttatgaatgtagtttaagacgtatgcaaactagatactttgcctct 6598
Query: 301 aatactaattttrasactaagctgtaattcaaactattcaatgtttgtattgaattttcg 360
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6597 aatactaattttaacactaagctgtaattcaaactattcaatgtttgtattgaattttcg 6538
Query: 361 araacttcaacactatttcccactggttgggagaagaacttcacccacacaagcacgcag 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6537 aaaacttcaacactatttcccactggttgggagaagaacttcacccacacaagcacgcag 6478
Query: 421 kg-agcctgcragcgttgcgatgcaatacagagagtgcaagcsaatagggccacgataga 479
| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6477 tgctacctgcaagcgttgcgatgcaatacagagagtgcaagccaatagggccacgataga 6418
Query: 480 gctgggcctaagctgcgtagtggttaggctggaaactaggaatcgtggacgggagagggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6417 gctgggcctaagctgcgtagtggttaggctggaaactaggaatcgtggacgggagagggt 6358
Query: 540 atgckaagggggcggrtcctgtccaacccacagaggattggacatggatcccgccacgta 599
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6357 atgctaagggggcggatcctgtccaacccacagaggattggacatggatcccgccacgta 6298
Query: 600 cttggtgctgcgagagtaaaaggttcagcctgtggacctgattctgctggaagtattttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6297 cttggtgctgcgagagtaaaaggttcagcctgtggacctgattctgctggaagtattttc 6238
Query: 660 cctctagtcaacccctctcctgtactccatcaaaactgaattttcctaattaagaatcag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6237 cctctagtcaacccctctcctgtactccatcaaaactgaattttcctaattaagaatcag 6178
Query: 720 atatttctgctcaaatttaaggagagttgtcaacagataatttttcaagaaccct 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6177 atatttctgctcaaatttaaggagagttgtcaacagataatttttcaagaaccct 6123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4910
Number of Sequences: 1807
Number of extensions: 4910
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 774
length of database: 10,358,551
effective HSP length: 16
effective length of query: 758
effective length of database: 10,329,639
effective search space: 7829866362
effective search space used: 7829866362
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)